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VAST similar structures for: MMDB  11638, 1D5R sequence A domain 1.
Overview: There are two main sections to this page. The first section consists of the alignment view controls, the list controls, and the advanced similar structure search controls. The second section is the VAST similar structure list itself.
 
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using for; VAST similar structures
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Move the mouse over the red alignment footprints in the graphics below and click, you will obtain a structure-based sequence alignment.
Total related structures 5972; 1 - 60 of 546 representatives from the Medium redundancy subset displayed.   Page: 
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Total related structures 5972; 1 - 60 of 546 representatives from the Medium redundancy subset displayed.   Page: 




Citing VAST:  Gibrat JF, Madej T, Bryant SH, "Surprising similarities in structure comparison", Curr Opin Struct Biol. 1996 Jun; 6(3):377-85.
Citing similarity scores:  Panchenko AR, Madej T, "Analysis of protein homology by assessing the (dis)similarity in protein loop regions.", Proteins. 2004 Nov 15; 57(3):539-47.
Citing homologous cores and loops:  Madej T, Panchenko AR, Chen J, Bryant SH, "Protein homologous cores and loops: important clues to evolutionary relationships between structurally similar proteins.", BMC Struct Biol. 2007 Apr 10; 7(1):23.
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